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导师姓名：施超 出生年月：1986年11月 职称： 教授 学历（学位）：博士 导师类别：博士生导师、硕士生导师 招生专业：生物与医药、海洋化学、轻工技术与工程 研究方向：生物进化与生态 联系方式： chaoshi@qust.edu.cn |
一、 个人简介
施超，男，无党派人士，教授，博士生导师，山东省泰山学者青年专家。围绕被子植物白垩纪以来的适应性演化机制及多样性变异历程开展研究工作，共发表SCI论文30余篇，包含Nature Plants（封面论文）、Nature Ecology & Evolution、PNAS等。主持国家自然科学基金面上项目、山东省自然科学基金面上项目、现代古生物学与地层学国家重点实验室课题等。兼任Plants、Diversity、Genes、Forests、International Journal of Plant Biology等SCI期刊的客座或主题编辑。
二、 研究方向
聚焦被子植物在“白垩纪温室”下的适应性演化机制及多样性变异历程，依据古今结合的研究理念，以形成于白垩纪中期的琥珀化石为对象，结合大像素堆叠摄影、生物信息分析、X射线断层扫描与数字重建等技术手段，综合运用植物形态分类学、分子系统学、基因组学、生物地理学、环境生物学、古植物学等多学科知识，深入探讨“达尔文的讨厌之谜”。
三、 教育及工作经历
1．2005.09至2009.06，云南大学，生态学，获得学士学位；
2. 2009.09至2014.07，中国科学院昆明植物研究所，植物学，获得博士学位；
3. 2014.08至2019.05，中国科学院昆明植物研究所，助理研究员；
4. 2016.01至2019.01，云南省热带作物科学研究所，特聘研究员（兼）；
5. 2019.06至今，澳门永利yl6776，教授。
四、个人荣誉与获奖
（1）2023届泰山学者青年专家，中共山东省委人才工作领导小组；
（2）第三批山东省一流本科课程，骨干成员，山东省教育厅；
（3）第七届山东省“互联网+”大学生创新创业大赛银奖，指导教师，山东省教育厅；
（4）第八届山东省“互联网+”大学生创新创业大赛银奖，指导教师，山东省教育厅；
（5）2024年校级教学成果奖，骨干成员，澳门永利yl6776。
五、承担的主要科研项目
（1）泰山学者青年专家，主持；
（2）国家自然科学基金面上项目，主持；
（3）国家自然科学基金青年基金，主持；
（4）山东省自然科学基金面上项目，主持；
（5）云南省科技创新专项，共同主持;
（6）现代古生物学与地层学国家重点实验室开放课题，主持；
六、教学情况
1．主讲课程：
（1）现主讲：《进化之美》（本科）；
（2）历任主讲：《生物信息学》（本科）、《学术论文写作》（本科）。
2．科普写作：
(1)王硕, 施超, 姜日新, 殷晓峰, 蔡昊鸿, 龙晓璇, 宋维才, 吴晓萌等. 琥珀纪.生命世界, 2022, 387(1): 1-41.
(2)王硕, 施超, 韩伟琦. 琥珀之美. 生命世界, 2023, 401(3): 1-47.
七、论文、专著与专利
论文
1. Shi WB, Huang YH, Hu SQ, Wang H, Lin QH, Zhang ZR, Shi C* & Wang S. Exploring the chloroplast genomics, comparative analysis, evolution, and phylogenetic relationships of Phylica pubescens (Rhamnaceae) in the Cape Flora. South African Journal of Botany, 2024, 164: 374-385.
2. Peng Y, Shi C*, Long XX, Engel MS & Wang S*. Discovery of a new species of Eomysmauchenius from mid-Cretaceous Kachin amber (Araneae: Archaeidae). Cretaceous Research, 2024, 153: 105703.
3. Guo X, Lin QH, Zheng XC, Wang S, Li Q & Shi C*. Protect native fish in China’s Yellow River. Science, 2024, 383(6683): 598.
4. Long XX, Peng Y, Zhang HR, Fan Y, Shi C & Wang S*. Microlepia burmasia sp. nov., a new fern species from mid-Cretaceous Kachin amber of norther Myanmar (Dennstaedtiaceae, Polypodiales). Cretaceous Research, 2023, 143: 105417.
5. Shi WB, Song WC, Zhao YQ, Shi C* & Wang S*. Complete chloroplast genomes of four Atalantia (Rutaceae) species: insights into comparative analysis, phylogenetic relationships, and divergence time estimation. Plant Systematics and Evolution, 2023, 309(5): 31.
6. Long XX, Peng Y, Feng Q, Engel MS, Shi C* & Wang S*. A new fossil fern of the Dryopteridaceae (Polypodiales) from the mid-Cretaceous Kachin amber. Palaeobiodiversity and Palaeoenvironments, 2023, 103(3): 489-494.
7. Shi WB, Hu SQ, Song WC, Huang, YH, Shi C* & Wang S*. Uncovering the first complete chloroplast genomics, comparative analysis, and phylogenetic relationships of the medicinal plants Rhamnus cathartica and Frangula alnus (Rhamnaceae). Physiology and Molecular Biology of Plants, 2023, 29(6): 855-869.
8. Shi WB, Song WC, Liu J, Shi C* & Wang S*. Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of subgenera. Scientia Horticulturae, 2023, 313: 111909.
9. Shi WB, Song WC, Chen ZM, Cai HH, Gong Q, Liu Jin, Shi C* & Wang S*. Comparative chloroplast genome analyses of diverse Phoebe (Lauraceae) species endemic to China provide insight into their phylogeographical origin. PeerJ, 2023, 12, e14293.
10. Peng Y, Jiang RX, Shi C, Song WC, Long XX, Engel MS & Wang S*. Alitrepaninae, a new subfamily of auger beetles from mid-Cretaceous Kachin amber of northern Myanmar (Coleoptera: Bostrichidae). Cretaceous Research, 2022, 137: 105244.
11. Zhang HR, Shi C, Long XX, Feng Q, Cai HH, Lü YT & Wang S*. A new fossil record of Thyrsopteridaceae (Cyatheales) from the mid-Cretaceous amber of Myanmar. Palaeoworld, 2022, 31(3): 478-484.
12. Song WC, Chen ZM, Shi WB, Han WQ, Feng Q, Shi C*, Engel MS & Wang S*. Comparative Analysis of Complete Chloroplast Genomes of Nine Species of Litsea (Lauraceae): Hypervariable Regions, Positive Selection, and Phylogenetic Relationships. Genes, 2022, 13(9): 1550.
13. Song WC, Chen ZM, He Li, Feng Q, Zhang Hongrui, Du Guilin, Shi C* & Wang S. Comparative Chloroplast Genome Analysis of Wax Gourd (Benincasa hispida) with Three Benincaseae Species, Revealing Evolutionary Dynamic Patterns and Phylogenetic Implications. Genes, 2022, 13(3): 461.
14. Peng Y, Jiang RX, Shi C, Long XX, Engel MS & Wang S*. A New Subgenus and Species of Priochirus from Mid-Cretaceous Kachin Amber (Coleoptera: Staphylinidae: Osoriinae). Insects, 2022, 13(6): 513.
15. Song WC, Ji CX, Chen ZM, Cai HH, Wu XM, Shi C* & Wang S*. Comparative analysis the complete chloroplast genomes of nine Musa species: Genomic Features, Comparative Analysis and Phylogenetic Implications. Frontiers in Plant Science, 2022, 13: 832884.
16. Wang S, Long XX, Zhang HR, Cai HH, Engel MS & Shi C*. A semi-aquatic fern (Marsileaceae) from the mid-Cretaceous amber of northern Myanmar. Cretaceous Research, 2022, 133: 105119.
17. Jiang RX, Shi C, Zhang, HR, Cai HH, Long XX, Wang S* & Engel MS. Comment on "Mother snail labors for posterity in bed of mid-cretaceous amber" by A. Jochum, T. Yu and T.A. Neubauer. Gondwana Research, Volume 97: 68–72. Gondwana Research, 2022, 101, 21-23.
18. Niu YF, Lu YJ, Song WC, He XY, Liu ZY, Zheng C, Wang S, Shi C* & Liu J*. Assembly and comparative analysis of the complete mitochondrial genome of three Macadamia species (M. integrifolia, M. ternifolia and M. tetraphylla). PLoS ONE, 2022, 17(5): e0263545.
19. Li Y, Wang YD*, Feldberg K, Wang S*, Shi C, Cui YM, Zhang XQ. New insights into the moss genus Vetiplanaxis with a description of V. obtusus sp. nov. from the mid-Cretaceous Kachin amber, Myanmar. Review of Palaeobotany and Palynology, 2022, 301: 104659.
20. Shi C, Wang S*, Cai HH, Zhang HR, Long XX, Tihelka E, Song WC, Feng Q, Jiang RX, Cai CY, Lombard N, Li X, Yuan J, Zhu JP, Yang HY, Liu XF, Xiang QP, Zhao ZT, Long CL, Schneider H, Zhang XC, Peng H, Li DZ, Fan Y, Engel MS, Wang YD, Spicer RA. Fire-prone Rhamnaceae with South African affinities in Cretaceous Myanmar amber. Nature Plants, 2022, 8(2), 125-135. (封面论文)
21. Shi C, Cai HH, Jiang RX, Wang S*, Engel MS, Yuan J, Bai M, Yang D, Long CL, Zhao ZT, Zhang DX*, Zhang XC*, Peng H*, Wang YD* & Spicer RA*. Balance scientific and ethical concerns to achievea nuanced perspective on ‘blood amber.’ Nature Ecology & Evolution, 2021(5), 705-706.
22. Jiang RX, Song WC, Yang HY, Shi C* & Wang S*. Discovery of the first Onthophilus species from mid-Cretaceous Burmese amber (Coleoptera: Histeridae). Cretaceous Research, 2020, 111: 104443.
23. Liu J, Shi C, Shi CC, Li W, Zhang QJ, Zhang Y, Li K, Lu HF, Shi C, Zhu ST, Xiao ZY, Nan H, Yue Y, Zhu XG, Wu Y, Hong XN, Fan GY, Tong Y, Zhang D, Mao CL, Liu YL, Hao SL, Liu WQ, Lv MQ, Zhang HB, Liu Y, Hu TGR, Wang JP, Wang JH, Sun YH, Ni SB, Chen WB, Zhang XC, Jiao YN, Eichler EE, Li GH, Liu X & Gao LZ*. The chromosome-based rubber tree genome provides new insights into spurge genome evolution and rubber biosynthesis. Molecular plant, 2020, 13(2), 336-350.
24. Zhang L, Huang YM, Wang M, Guo YF, Liang J*, Yang XR, Qi WJ, Wu YJ, Si JL, Zhu SR, Li Z, Li RQ, Shi C*, Wang S, Zhang QJ, Tang ZL, Wang LX, Li K, Fei JF & Lan GQ*. Development and genome sequencing of a laboratory-inbred miniature pig facilitates study of human diabetic disease. iScience, 2019, 19, 162–176. (封面论文)
25. Tang CF, Shi C, Wang S* & Yang D*. The first report of Dolichopodidae from mid-Cretaceous amber of Northern Myanmar. Cretaceous Research, 2019, 104, 104179.
26. Shi C#, Wang S#, Zhao F, Peng H & Xiang CL*. Full Chloroplast Genome Assembly of 11 Diverse Watermelon Accessions. Frontiers in Genetics, 2017, 8: 46.
27. Liu J, Shi C*. The complete chloroplast genome of wild shaddock, Citrus maxima (Burm.) Merr. Conservation Genetics Resources, 2017, 9(1), 1-3.
28. Xia EH, Zhang HB, Sheng J, Li K, Zhang QJ, Kim C, Zhang Y, Liu Y, Zhu T, Li W, Huang H, Nan H, Shi C, Shi C, Jiang JJ, Mao SY, Jiao JY, Zhang D, Zhao Y, Zhao YJ, Zhang LP, Liu YL, Liu BY, Yu Y, Shao SF, Ni DJ, Eichler EE & Gao LZ*. The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis. Molecular Plant, 2017, 10: 866-877.
29. Shi C#, Wang S#, Xia EH#, Jiang JJ, Zeng FC & Gao LZ*. Full transcription of the chloroplast genome in photosynthetic eukaryotes. Scientific Reports, 2016, 6: 30135.
30. Wang S, Shi C, Zhang YJ, Hu GX & Gao LZ*. Trading away ancient amber's secrets. Science, 2016, 351(6276): 926. (Letter)
31. Yin C & Shi C*. Mitochondrial genome of the neotropical Parnell's mustached bat Pteronotus parnellii (Pteronotus, Mormoopidae). Mitochondrial DNA, 2015, 26(6), 921-922.
32. Zhang QJ#, Zhu T#, Xia EH#, Shi C#, Liu YL#, Zhang Y#, Liu Y#, Jiang WK, Zhao YJ, Mao SY, Zhang LP, Huang H, Jiao JY, Xu PZ, Yao QY, Zeng FC, Yang LL, Gao J, Tao DY, Wang YJ, Bennetzen JL & Gao LZ*. Rapid diversification of five Oryza AA genomes associated with rice adaptation. PNAS, 2014, 111(46), 4954-4962.
33. Huang H, Shi C, Liu Y, Mao SY & Gao LZ. Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships. BMC Evolutionary Biology, 2014, 14(1), 151.
34. Wu J, Kong XY, Shi C, Gu YQ, Jin CY, Gao LZ* & Jia JZ*. Dynamic evolution of Rht-1 homologous regions in grass genomes. PLoS ONE, 2013, 8(9), e75544.
35. Wang S#, Shi C# & Gao LZ*. Plastid genome sequence of a wild woody oil species, Prinsepia utilis, provides insights into evolutionary and mutational patterns of Rosaceae chloroplast genomes. PLoS ONE, 2013, 8(9), e73946.
36. Shi C, Liu Y, Huang H, Xia EH, Zhang HB & Gao LZ*. Contradiction between plastid gene transcription and function due to complex posttranscriptional splicing: an exemplary study of ycf15 function and evolution in angiosperms. PLoS ONE, 2013, 8(3), e59620.
37. Shi C, Hu N, Huang H, Gao J, Zhao YJ & Gao LZ*. An improved chloroplast DNA extraction procedure for whole plastid genome sequencing. PLoS ONE, 2012, 7(2), e31468.
专利
1. 王硕, 蔡昊鸿, 施超. 一种用于琥珀定性分析的VR虚拟成像系统, ZL2022109148085.
2. 蔡昊鸿, 王硕, 施超. 一种化石模型成像的轨道机构, ZL2022222989980.
3. 蔡昊鸿, 王硕, 施超. 一种琥珀碎料的溶解再压设备, ZL2022221722296.
4. 蔡昊鸿, 王硕, 施超. 一种琥珀碎料的熔结成型装置, ZL2022220032378.
